Pikromycin

Fecik, Lakshmanan, Salomon and Sherman. JOC, 2006, ASAP. DOI: 10.1021/jo062047u.
An interesting paper, this ‘un. The group are targeting the two macrolides; narbonolide and it’s big brother, pikromycin, using a biotransformation to perform the glycosidation and oxidation. However, they’ve got to make narbonolide first!

As shown in the retro, the linear molecule is constructed through a pair of Evan’s aldols. The synthesis of the constituents was not discussed, primarily because this is a second generation synthesis. These earlier works were generally found wanting in the macrocyclisation, but Fecik and his team excelled, with a 90% yield. This then allowed them to proceed to the biotransformation.

This must have been a fairly scary step; the group did the reaction on a 4mg scale, which a reasonable amount to submit to such an advance precursor, especially considering the lack of presidence. The experimental details mean nothing to me; lots to learn, as ever:
“A concentrated spore stock (10 μL) of the Streptomyces venezuelae pikAI deletion mutant BB138 was used to inoculate 50 mL of ATCC172 media (10 g of glucose, 20 g of soluble starch, 5 g of yeast extract, 5 g of NZ amine type A, and 1 g of CaCO3 per 1 L of H2O) in a 250 mL baffled flask and incubated at 30 °C for 2 days with shaking. This seed culture (5 mL) was used to inoculate fresh ATCC172 media (50 mL) containing narbonolide (1, 4 mg in 400 μL EtOH) or EtOH (400 μL) and incubated at 30 °C for 3 days with shaking…”
No yield was given for the transformation, just a HPLC trace, showing both SM and product.

Overall, a very competent macrolide synthesis, and a nice application of a biological transformation (that keep you happy ddd??!:))











last step is interesting though. It looks like pretty standart culture technique and pretty easy to perform if you have incubator/shaker. And it is very easy to generate that gene deletion mutant, bio people do it on daily basis
standart should be standard, sorry for that guys
Apologies accepted, ddd
That’s why some people is in the directed evolution of enzymes bussiness
The last procedure reminds me those famouse alchemist recipes